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人员

  • 简要介绍:陈靖祺,复旦大学类脑智能科学与技术研究院副研究员,博士生导师。复旦大学生物类本硕博学位(师从田卫东教授),美国加州大学伯克利分校博士后(师从Steven E. Brenner教授)。2019年加入复旦大学类脑智能科学与技术研究院,历任青年副研究员、稳定聘期副研究员,2026年独立建组。以主要作者在多个高水平期刊发表研究论文,包括Science Bulletin, Genome Medicine, Nucleic Acids Research, Alzheimer's and Dementia, Molecular Psychiatry 等。课题组当前研究方向:(1)融合基因组、单细胞及空间组大数据,解析基因组重复元件如何参与脑疾病发生发展,挖掘诊疗新靶点;(2)面向脑疾病分子诊断与基因编辑精准治疗需求,研发AI辅助的模型与方法。
  • 代表成果:

    全部发表信息(Publications):https://www.researchgate.net/profile/Jingqi_Chen

    代表性论文(Selected papers):

    * corresponding author(s)

    (a) Computational genomics of brain disorders:

    (a1) An, Z., ..., Chen, J.* & Zhao, X. M.* Characterizing schizophrenia-relevant structural variants and tandem repeats through long-read sequencing. Science Bulletin, doi:10.1016/j.scib.2025.11.004 (2026).

    (a2) Cao, J., Zhang, C., ..., Cheng, T. L.*, Chen, J.*, Zhao, X. M.* & for the Alzheimer's Disease Neuroimaging Initiative. Integrating rare pathogenic variant prioritization with gene-based association analysis to identify novel genes and relevant multimodal traits for Alzheimer's disease. Alzheimer's & Dementia. doi:10.1002/alz.14444 (2025).

    (a3) Chen, J.*, ... ,& Zhao, X. M.* Disrupted long-range gene regulations elucidate shared tissue-specific mechanisms of neuropsychiatric disorders. Molecular Psychiatry, doi:10.1038/s41380-022-01529-3 (2022).

    (a4) Chen, J. & Tian, W. Explaining the disease phenotype of intergenic SNP through predicted long range regulation. Nucleic Acids Research. doi:10.1093/nar/gkw519 (2016).

    (b) Computational models to facilitate molecular diagnosis and genome editing systems

    (b1) Zhang, C., Chen, Z., Cao, J., Zhang, Z., Li, W. K.,..., Zhao, X. M.*, Chen, J.*, Zhan, C.* & Cheng, T. L.* RNA inosine sensor-guided TadA mutational scanning for toxicity minimization of adenine base editors. Molecular Therapy, doi:10.1016/j.ymthe.2025.10.011 (2025).

    (b2) Yuan, B., Zhang, S., Song, L., ..., Chen, J.*, Zhao, X. M.* & Cheng, T. L.* Engineering of cytosine base editors with DNA damage minimization and editing scope diversification. Nucleic Acids Res 51, e105, doi:10.1093/nar/gkad855 (2023).

    (b3) Chen, J.* A fully-automated event-based variant prioritizing solution to the CAGI5 intellectual disability gene panel challenge. Human Mutation. doi:10.1002/humu.23781 (2019).